Tools and Methods for Genome Science and Reproducible Research | Solid Tumor Theraputics

Thursday, November 9, 12:00pm - 4:00pm (EST)

Time shown in-04:00 America, New York

In this hands-on workshop, participants will learn how to analyze and visualize bulk and single-cell RNA-seq data. Methods covered include differential gene expression analysis, clustering, classification, and gene set enrichment analysis (GSEA). Attendees will learn to use the GenePattern, Gene Set Enrichment Analysis (GSEA), and Integrative Genomics Viewer (IGV) tools to perform these analyses and visualizations following the principles of open, reproducible research.

As the date approaches we will send out a pre-workshop assignment that will have attendees create accounts on all of the resources we will be using.

Presenters: Anthony Castanza, PhD, Edwin Huang, Michael Reich, Thorin Tabor, UCSD Mesirov Lab

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Add to Calendar 2023/11/09 09:00:00 2023/11/09 13:00:00 America/Los_Angeles Tools and Methods for Genome Science and Reproducible Research | Solid Tumor Theraputics In this hands-on workshop, participants will learn how to analyze and visualize bulk and single-cell RNA-seq data. Methods covered include differential gene expression analysis, clustering, classification, and gene set enrichment analysis (GSEA). Attendees will learn to use the GenePattern, Gene Set Enrichment Analysis (GSEA), and Integrative Genomics Viewer (IGV) tools to perform these analyses and visualizations following the principles of open, reproducible research.

As the date approaches we will send out a pre-workshop assignment that will have attendees create accounts on all of the resources we will be using.

Presenters: Anthony Castanza, PhD, Edwin Huang, Michael Reich, Thorin Tabor, UCSD Mesirov Lab false MM/DD/YYYY 60 OPAQUE aRHTJAtebzuytgVCsmlE218689

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